KERAGAMAN GENETIK ANAKAN Shorea leprosula BERDASARKAN PENANDA MIKROSATELIT

Purnamila Sulistyawati, AYPBC Widyatmoko, ILG Nurtjahjaningsih

Abstract


Genetic diversity value of offspring might indicate a reproductive success in a forest. Aim in this study was to access genetic diversity values of offspring of Shorea leprosula from different forest types. Leaf samples were collected from six population i.e. a plantation from Carita, and five natural forests from Gunung Bunga A and B, SBK, ITCI and Gunung Lumut. Using four microsatellite markers, the results showed that SBK population maintained high value of genetic diversity. Values of expected heterozygosity (HE) ranged between 0.717 (Carita) and 0.836 (SBK). Values of coefficient inbreeding (F) were insignificant deviated from Hardy-Weinberg Equilibrium, but the value was significant in SBK population. PCA analysis demonstrated a cluster among Gunung Bunga A, SBK, ITCI, and Gunung Lumut. Amova showed that different province significantly contributed 1% to the value of genetic diversity of S. leprosula.

Keywords


Shorea leprosula; offspring; genetic diversity; microsatellite

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References


Adriyanti, D. W., Subiakto, A. dan Kumala. 2005. Shorea leprosula Miq. . Informasi Jenis No. 001/ITTO-PD41/05 Proyek ITTO PD 41/00 Rev. 3 (F,M). Fakultas Kehutanan Universitas Gadjah Mada. Yogyakarta.

Brearley, F. Q., Proctor, J., Suriantata, Nagy, L., Dalryple, G. and Voysey, B. C. 2007. Reproductive Phenology Over a 10-yearPeriode in a Lowland Evergreen Rain Forest of Central Borneo. Journal of Ecology, 95: 828 839.

Butcher, P. A., Glaubitz, J. C. and Moran, G. F. 1999. Applications For Microsatellite Markers In The Domestication And Conservation of Forest Trees. Forest Genetics Resources Information, 27: 34-42.

Cao, C-P., 2006. Genetic variation of the genus Shorea (Dipterocarpaceae) in Indonesia. Faculty of Forest Sciences and Forest Ecology,Georg-August University of Göttingen. Göttingen, Göttingen. Doctoral: 131.

Cao, C-P., Gailing, O., Siregar, I. Z., Siregar, U. J. and Finkeldey, R. 2009. Genetic variation in nine Shorea species (Dipterocarpaceae) in Indonesia revealed by AFLPs. Tree Genetics & Genomes 5(407-420): 407-420.

Chase, M., Kesseli, R. and Bawa, K. 1996. Microsatellite Markers For Population And Conservation Genetics Of Tropical Trees. American Journal of Botany, 83: 173-181.

Fuchs, E. J., Lobo, J. A. and Quesada, M. 2003. Effects of Forest Fragmentation and Flowering Phenology on the Reproductive Success and Mating Patterns of the Tropical Dry Forest Tree Pachira quinata. Conservation Biology, 17(1): 149-157.

Fukue, Y., Kado, T., Lee, S. S., Ng, K. K. S., Muhammad, N. and Tsumura, Y. 2007. Effects of flowering tree density on the mating system and gene flow in Shorea leprosula (Dipterocarpaceae) in Peninsular Malaysia. Journal of Plant Research, 120(3): 413-420.

Glaubitz, J. C. and Moran, G. F. 2000. Genetic Tools: The Use of Biochemical and Molecular Markers. Forest Conservation Genetics. A. Young, D. Boshier and T. Boyle. Australia, CSIRO Publishing: 39-59.

Isoda, K., Yasman, I., Rimbawanto, A. and Prihatini, I. 2001. Estimation of Genetic Variation of Shorea leprosula in The Hedge-orchard of the Inhutani I Dipterocarp Center East Kalimantan using DNA Markers. International Seminar Proceeding : In-situ and exsitu conservation tropical trees Faculty of Forestry, Gadjah Mada University, Yogyakarta.

Law., B., Mackowski, C., Schoer, L. and Tweedie, T. 2000. Flowering phenology of myrtaceous trees and their relation to climatic, environmental and disturbance variables in northern New South Wales. Australian Ecology, 25: 160-178.

Lee, S. L. 2000. Mating System Parameters in A Tropical Tree Species, Shorea leprosula Miq. (Dipterocarpaceae), from Malaysian Lowland Dipterocarp Forest. BIOTROPICA, 32(4a): 693-702.

Lee, S. L., Ang, K. C. and Norwati, M. 2000. Genetic Diversity of Dryobalanops aromatica Gaertn.F. (Dipterocarpaceae) In Peninsular Malaysia and Its Pertinence to Genetic Conservation and Tree Improvement. Forest Genetics, 7(3): 211-219.

Lee, S. L. 2000. Genetic Diversity of a Tropical Tree Species, Shorea leprosula Miq. (Dipterocarpaceae), in Malaysia: Implications for Conservation of Genetic Resources and Tree Improvement. BIOTROPICA, 32(2): 213-224.

Lemmens, R. H. M. J. and Soerianagara, I. 1994. Timber Trees: Major Commercial Timbers. Plant Resources of South-East Asia. Prosea Foundation. Bogor 5(1).

Lestyaningsih, I., Nai’em, M. dan Winarni, W. W. 2005. Variasi Isozim Meranti merah (Shorea leprosula Miq.) dari Sumatera pada Tegakan Konservasi Ex-Situ. Dalam: Hardiyanto, E.B (Ed). Peran Konservasi Sumber Daya Genetik, Pemuliaan dan Silvikultur Dalam Mendukung Rehabilitasi Hutan. Prosiding Seminar Nasional Peningkatan Produktifitas Hutan. Fakultas Kehutanan UGM & International Tropical Timber Organization. 359-371.

Lian, C., Miwa, M. and Hogetsu, T. 2001. Outcrossing and paternity analysis of Pinus densiflora (Japanese red pine) by microsatellite polymorphism. Heredity, 87: 88-98. Murawski, D. A. and Bawa, K. S. 1994. Genetic Structure and Mating System of Stemonophorus oblongifolius (Dipterocarpaceae) in Sri Lanka. American Journal of Botany, 81(2): 155- 160.

Nai’em, M., Raharjo, P. dan Wardana, E. K. 2005. Evaluasi Awal Uji Keturunan Shorea leprosula Miq. di PT. ITCI KU, Kalimantan Timur. Dalam: Hardiyanto, E.B (Ed). Peran Konservasi Sumber Daya Genetik, Pemuliaan dan Silvikultur Dalam Mendukung Rehabilitasi Hutan. Prosiding Seminar Nasional Peningkatan Produktifitas Hutan. Fakultas Kehutanan UGM & International Tropical Timber Organization 193-201.

Ozawa, H., Watanabe, A., Uchiyama, K., Saito, Y. and Ide, Y. 2012. Genetic diversity of Pinus densiflora pollen flowing over fragmented populations during a mating season. Journal Forestry Research, 17: 488-498.

Peakall, R. and Smouse, P. E. 2006. GENALEX 6: genetic analysis in Excel, Population genetic software for teaching and research. Molecular Ecology Notes, 6: 288-295.

Prihatini, I., Rimbawanto, A. and Isoda, K. 2001. Population genetic study of Shorea leprosula using RAPDs (Random Amplied Polymorphic DNAs). In : Thielges, B.A., Sastrapraja, S.D., and Rimbawanto, A. (Eds):In-situ and ex-situ conservation tropical trees. Proceeding International Seminar. Faculty of Forestry, Gadjah Mada University, Yogyakarta. ( 505-510).

Rayan dan Cahyono, D. D. N. 2012. Eksplorasi Pengumpulan Materi Genetik Shorea leprosula Miq. untuk Populasi Dasar dan Populasi Pemuliaan. Info Teknis Dipterokarpa, 5(1): 35-45.

Rimbawanto, A. and Isoda, K. 2001. Genetic structure of Shorea leprosula in a single population revealed by microsatellite markers. In : Thielges, B.A., Sastrapraja, S.D., and Rimbawanto, A. (Eds): Insitu and ex-situ conservation tropical trees. Proceeding International Seminar. Faculty of Forestry, Gadjah Mada University, Yogyakarta,: 333-340.

Rimbawanto, A. dan Suharyanto. 2005. Keragaman Genetik Populasi Shorea leprosula Miq. dan Implikasinya Untuk Program Konservasi Genetik. Dalam: Hardiyanto, E.B (Ed). Peran Konservasi Sumber Daya Genetik, Pemuliaan dan Silvikultur Dalam Mendukung Rehabilitasi Hutan. Prosiding Seminar Nasional Peningkatan Produktifitas Hutan. Fakultas Kehutanan UGM & International Tropical Timber Organization. 373-382.

Rudjiman. 1997. Identifikasi 15 Jenis Anggota Genus Shorea Roxb. di Kalimantan Tengah. Yogyakarta, Fakultas Kehutanan UGM.

Rudjiman and Adriyanti, D. T. 2002. Identification Manual of Shorea spp. ITTO PD 16/96 Rev. 4 (F). Yogyakarta, Faculty of Forestry Gadjah Mada University.

Sastrapradja, S., Kartawinata, K., Roesmantyo, U., Soetisna, Wiriadinata, H. dan Riswan, S. 1997. Jenis-jenis Kayu di Indonesia. Proyek Sumberdaya Ekonomi. LBNLIPI. Bogor.

Sayektiningsih, T. 2010. Mengenal Ciri Morfologi Beberapa Jenis Buah Famili Dipterocarpaceae. Mitra Hutan Tanaman, 5(1): 15-19.

Suzuki, S., Tamaki, I., Ishida, K. and Tomaru, N. 2008. Relationships Between Flowering Phenology and Female Reproductive Success in The Japanese Tree Species Magnolia stellata. Botany, 86: 248-258.

Shiraishi, S. and Watanabe, A. 1995. Identification of chloroplast genome between Pinus densiflora Sieb et Zucc and P. thumbergii Parl based on the polymorphism in rbcL gene. Journal of Japanese Forestry Society, 77: 429-436.

Siregar, U. J. 2001. Genetical studies for conservation of tropical timber species in Indonesia. In:Thielges, B.A.,Sastrapraja, S.D.,Rimbawanto, A. (Eds):In-situ and ex-situ conservation tropical trees. Proceeding International Seminar., Faculty of Forestry, Gadjah Mada University, Yogyakarta. Keragaman Genetik Anakan Shorea Leprosula Berdasarkan Penanda Mikrosatelit Purnamila Sulistyawati, AYPBC Widyatmoko, ILG Nurtjahjaningsih 183

Soekotjo. 2001. The status of ex-situ conservation of commercial tree species in Indonesia. In : Thielges, B.A., Sastrapraja, S.D., and Rimbawanto, A. (Eds):In-situ and ex-situ conservation tropical trees. Proceeding International Seminar. Faculty of Forestry, Gadjah Mada University, Yogyakarta: 147-160.

Suseno, O. H. 2001. Current status of tree improvement in Indonesia. In Thielges, B.A., Sastrapraja, S.D., and Rimbawanto, A. (Eds):In-situ and exsitu conservation tropical trees. Faculty of Forestry, Gadjah Mada University, Yogyakarta: 231-261.

Tani, N., Tsumura, Y., Kado, T., Taguchi, Y., Lee, S. L., Muhammad, N., Ng, K. K. S., Numata, S., Nishimura, S., Konuma, A. and Okuda, T. 2009. Paternity analysisbased inference of pollen dispersal patterns, male fecundity variation, and influence of flowering tree density and general flowering magnitude in two dipterocarp species. Annals of Botany, 104: 1421-1434.

Tauntz, D. 1989. Hypervariability of Simple Sequences As A General Source for Polymorphic DNA Markers. Nucleic Acids Research, 25: 6463-6471.

Torimaru, T. and Tomaru, N. 2006. Relationships between flowering phenology, plant size, and female reproductive output in a dioecious shrub, Ilex leucoclada (Aquifoliaceae). Canadian Journal of Botany, 84: 1860-1869.

Ujino, T., Kawahara, T., Tsumura, Y., Nagamitsu, T., Yoshimaru, H. and Wickneswari, R. 1998. Development and polymorphism of simple sequnce repeat DNA markers for Shorea curtisii and other Dipterocarpaceae species. Heredity, 81: 422-428.




DOI: https://doi.org/10.20886/jpth.2014.8.3.171-183

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